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Oryza Knowledge-based
Molecular biological
The information of full-length cDNA clones from rice (Oryza sativa L. ssp. japonica cv. Nipponbare) collected and completely sequenced by the joint collaboration of National Institute of Agrobiological Sciences (NIAS), Foundation of Advancement of International Science (FAIS), and RIKEN institute (RIKEN), under the supervision of BRAIN (Bio-oriented Technology Research Advancement Institution) are depicted in this site. This work has been undertaken through the project named "The rice full-length cDNA". The full-length cDNA libraries have been constructed using around twenty kinds of stressed tissues of japonica rice and from which 170,000 clones have been randomly picked. According to the sequence information of 3' terminal single-pass sequence, clones are grouped into 28,000 independent groups. All the representative clones are completely sequenced.
NIAS This site is administrated by National Institute of Agrobiological Sciences No.495923
Our article is selected as one of "Fast Breaking Papers" by ISI Essential Science Indicator.

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Search clones Search clones by keyword
TU index TU information based on TIGR pseudomolecules
Accession ID index Accession ID index, Annotation list of Accesson ID
Cluster ID index Cluster ID index, Annotation list of cluster ID
Mapping viewer Mapping result to the TIGR Pseudomolecules
Motif index Motif ID index, InterPro Search Result
Similarity search Similarity search to our cDNA clones
Go search Search clones by Gene Ontology
Gene family analysis Analyses of gene families
Distribution Distribution of cDNA clones
Expression database Rice gene Expression Database (RED) II
Unmapped chimeric Unmapped chimeric FL-cDNA
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Link NIAS Rice genome tools
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